Improved sampling at the subspecies level solves a taxonomic dilemma - A case study of two enigmatic Chinese tit species (Aves, Passeriformes, Paridae, Poecile).
Identifieur interne : 000978 ( Main/Exploration ); précédent : 000977; suivant : 000979Improved sampling at the subspecies level solves a taxonomic dilemma - A case study of two enigmatic Chinese tit species (Aves, Passeriformes, Paridae, Poecile).
Auteurs : Christian Tritsch [Allemagne] ; Jochen Martens [Allemagne] ; Yue-Hua Sun [République populaire de Chine] ; Wieland Heim [Allemagne] ; Patrick Strutzenberger [Allemagne] ; Martin P Ckert [Allemagne]Source :
- Molecular phylogenetics and evolution [ 1095-9513 ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : DNA, Mitochondrial.
- classification : Passeriformes.
- genetics : Passeriformes.
- Animals, China, DNA Barcoding, Taxonomic, Genetic Loci, Phylogeny, Phylogeography, Species Specificity.
Abstract
A recent full species-level phylogeny of tits, titmice and chickadees (Paridae) has placed the Chinese endemic black-bibbed tit (Poecile hypermelaenus) as the sister to the Palearctic willow tit (P. montanus). Because this sister-group relationship is in striking disagreement with the traditional affiliation of P. hypermelaenus close to the marsh tit (P. palustris) we tested this phylogenetic hypothesis in a multi-locus analysis with an extended taxon sampling including sixteen subspecies of willow tits and marsh tits. As a taxonomic reference we included type specimens in our analysis. The molecular genetic study was complemented with an analysis of biometric data obtained from museum specimens. Our phylogenetic reconstructions, including a comparison of all GenBank data available for our target species, clearly show that the genetic lineage previously identified as P. hypermelaenus actually refers to P. weigoldicus because sequences were identical to that of a syntype of this taxon. The close relationship of P. weigoldicus and P. montanus - despite large genetic distances between the two taxa - is in accordance with current taxonomy and systematics. In disagreement with the previous phylogenetic hypothesis but in accordance with most taxonomic authorities, all our P. hypermelaenus specimens fell in the sister clade of all western and eastern Palearctic P. palustris. Though shared haplotypes among the Chinese populations of the two latter species might indicate mitochondrial introgression in this part of the breeding range, further research is needed here due to the limitations of our own sampling.
DOI: 10.1016/j.ympev.2016.12.014
PubMed: 27965081
Affiliations:
- Allemagne, République populaire de Chine
- Brandebourg, District de Dresde, Saxe (Land)
- Dresde, Potsdam, Pékin
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Le document en format XML
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Electronic address: martin.paeckert@senckenberg.de.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Senckenberg Naturhistorische Sammlungen, Königsbrücker Landstraβe 159, D-01109 Dresden</wicri:regionArea><placeName><region type="land" nuts="1">Saxe (Land)</region><region type="district" nuts="2">District de Dresde</region><settlement type="city">Dresde</settlement></placeName></affiliation></author></analytic><series><title level="j">Molecular phylogenetics and evolution</title><idno type="eISSN">1095-9513</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>China (MeSH)</term><term>DNA Barcoding, Taxonomic (MeSH)</term><term>DNA, Mitochondrial (genetics)</term><term>Genetic Loci (MeSH)</term><term>Passeriformes (classification)</term><term>Passeriformes (genetics)</term><term>Phylogeny (MeSH)</term><term>Phylogeography (MeSH)</term><term>Species Specificity (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN mitochondrial (génétique)</term><term>Animaux (MeSH)</term><term>Chine (MeSH)</term><term>Codage à barres de l'ADN pour la taxonomie (MeSH)</term><term>Locus génétiques (MeSH)</term><term>Passeriformes (classification)</term><term>Passeriformes (génétique)</term><term>Phylogenèse (MeSH)</term><term>Phylogéographie (MeSH)</term><term>Spécificité d'espèce (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Mitochondrial</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Passeriformes</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Passeriformes</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN mitochondrial</term><term>Passeriformes</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>China</term><term>DNA Barcoding, Taxonomic</term><term>Genetic Loci</term><term>Phylogeny</term><term>Phylogeography</term><term>Species Specificity</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Chine</term><term>Codage à barres de l'ADN pour la taxonomie</term><term>Locus génétiques</term><term>Phylogenèse</term><term>Phylogéographie</term><term>Spécificité d'espèce</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A recent full species-level phylogeny of tits, titmice and chickadees (Paridae) has placed the Chinese endemic black-bibbed tit (Poecile hypermelaenus) as the sister to the Palearctic willow tit (P. montanus). Because this sister-group relationship is in striking disagreement with the traditional affiliation of P. hypermelaenus close to the marsh tit (P. palustris) we tested this phylogenetic hypothesis in a multi-locus analysis with an extended taxon sampling including sixteen subspecies of willow tits and marsh tits. As a taxonomic reference we included type specimens in our analysis. The molecular genetic study was complemented with an analysis of biometric data obtained from museum specimens. Our phylogenetic reconstructions, including a comparison of all GenBank data available for our target species, clearly show that the genetic lineage previously identified as P. hypermelaenus actually refers to P. weigoldicus because sequences were identical to that of a syntype of this taxon. The close relationship of P. weigoldicus and P. montanus - despite large genetic distances between the two taxa - is in accordance with current taxonomy and systematics. In disagreement with the previous phylogenetic hypothesis but in accordance with most taxonomic authorities, all our P. hypermelaenus specimens fell in the sister clade of all western and eastern Palearctic P. palustris. Though shared haplotypes among the Chinese populations of the two latter species might indicate mitochondrial introgression in this part of the breeding range, further research is needed here due to the limitations of our own sampling.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">27965081</PMID><DateCompleted><Year>2017</Year><Month>09</Month><Day>25</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1095-9513</ISSN><JournalIssue CitedMedium="Internet"><Volume>107</Volume><PubDate><Year>2017</Year><Month>02</Month></PubDate></JournalIssue><Title>Molecular phylogenetics and evolution</Title><ISOAbbreviation>Mol Phylogenet Evol</ISOAbbreviation></Journal><ArticleTitle>Improved sampling at the subspecies level solves a taxonomic dilemma - A case study of two enigmatic Chinese tit species (Aves, Passeriformes, Paridae, Poecile).</ArticleTitle><Pagination><MedlinePgn>538-550</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S1055-7903(16)30418-3</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.ympev.2016.12.014</ELocationID><Abstract><AbstractText>A recent full species-level phylogeny of tits, titmice and chickadees (Paridae) has placed the Chinese endemic black-bibbed tit (Poecile hypermelaenus) as the sister to the Palearctic willow tit (P. montanus). Because this sister-group relationship is in striking disagreement with the traditional affiliation of P. hypermelaenus close to the marsh tit (P. palustris) we tested this phylogenetic hypothesis in a multi-locus analysis with an extended taxon sampling including sixteen subspecies of willow tits and marsh tits. As a taxonomic reference we included type specimens in our analysis. The molecular genetic study was complemented with an analysis of biometric data obtained from museum specimens. Our phylogenetic reconstructions, including a comparison of all GenBank data available for our target species, clearly show that the genetic lineage previously identified as P. hypermelaenus actually refers to P. weigoldicus because sequences were identical to that of a syntype of this taxon. The close relationship of P. weigoldicus and P. montanus - despite large genetic distances between the two taxa - is in accordance with current taxonomy and systematics. In disagreement with the previous phylogenetic hypothesis but in accordance with most taxonomic authorities, all our P. hypermelaenus specimens fell in the sister clade of all western and eastern Palearctic P. palustris. Though shared haplotypes among the Chinese populations of the two latter species might indicate mitochondrial introgression in this part of the breeding range, further research is needed here due to the limitations of our own sampling.</AbstractText><CopyrightInformation>Copyright © 2016 Elsevier Inc. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Tritsch</LastName><ForeName>Christian</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Senckenberg Naturhistorische Sammlungen, Königsbrücker Landstraβe 159, D-01109 Dresden, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Martens</LastName><ForeName>Jochen</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Institut für Zoologie, Johannes Gutenberg-Universität, 55099 Mainz, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sun</LastName><ForeName>Yue-Hua</ForeName><Initials>YH</Initials><AffiliationInfo><Affiliation>Key Laboratory of Animal Ecology and Conservation, Institute of Zoology, Chinese Academy of Science, 100101 Beijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Heim</LastName><ForeName>Wieland</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Institut für Biochemie und Biologie, AG Tierökologie, Universität Potsdam, Maulbeerallee 1, 14469 Potsdam, Germany; Amur Bird Project, Roseggerstraβe 14, 14471 Potsdam, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Strutzenberger</LastName><ForeName>Patrick</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Senckenberg Naturhistorische Sammlungen, Königsbrücker Landstraβe 159, D-01109 Dresden, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Päckert</LastName><ForeName>Martin</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Senckenberg Naturhistorische Sammlungen, Königsbrücker Landstraβe 159, D-01109 Dresden, Germany. Electronic address: martin.paeckert@senckenberg.de.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>12</Month><Day>11</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Mol Phylogenet Evol</MedlineTA><NlmUniqueID>9304400</NlmUniqueID><ISSNLinking>1055-7903</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004272">DNA, Mitochondrial</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058893" MajorTopicYN="N">DNA Barcoding, Taxonomic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004272" MajorTopicYN="N">DNA, Mitochondrial</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D056426" MajorTopicYN="N">Genetic Loci</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046109" MajorTopicYN="N">Passeriformes</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058974" MajorTopicYN="N">Phylogeography</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">DNA barcoding</Keyword><Keyword MajorTopicYN="Y">Multi-locus phylogeny</Keyword><Keyword MajorTopicYN="Y">Phylogeography</Keyword><Keyword MajorTopicYN="Y">Poecile hypermelaenus</Keyword><Keyword MajorTopicYN="Y">Poecile weigoldicus</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>07</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2016</Year><Month>11</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>12</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>12</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>9</Month><Day>26</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>12</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">27965081</ArticleId><ArticleId IdType="pii">S1055-7903(16)30418-3</ArticleId><ArticleId IdType="doi">10.1016/j.ympev.2016.12.014</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Allemagne</li><li>République populaire de Chine</li></country><region><li>Brandebourg</li><li>District de Dresde</li><li>Saxe (Land)</li></region><settlement><li>Dresde</li><li>Potsdam</li><li>Pékin</li></settlement></list><tree><country name="Allemagne"><region name="Saxe (Land)"><name sortKey="Tritsch, Christian" sort="Tritsch, Christian" uniqKey="Tritsch C" first="Christian" last="Tritsch">Christian Tritsch</name></region><name sortKey="Heim, Wieland" sort="Heim, Wieland" uniqKey="Heim W" first="Wieland" last="Heim">Wieland Heim</name><name sortKey="Martens, Jochen" sort="Martens, Jochen" uniqKey="Martens J" first="Jochen" last="Martens">Jochen Martens</name><name sortKey="P Ckert, Martin" sort="P Ckert, Martin" uniqKey="P Ckert M" first="Martin" last="P Ckert">Martin P Ckert</name><name sortKey="Strutzenberger, Patrick" sort="Strutzenberger, Patrick" uniqKey="Strutzenberger P" first="Patrick" last="Strutzenberger">Patrick Strutzenberger</name></country><country name="République populaire de Chine"><noRegion><name sortKey="Sun, Yue Hua" sort="Sun, Yue Hua" uniqKey="Sun Y" first="Yue-Hua" last="Sun">Yue-Hua Sun</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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